FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007081

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007081
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1593356
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGAAA13753.447812E-57.3298871
CTTGTGC11954.111229E-47.2291181
CTTGAAT14909.9153884E-56.7641571
CCTCCAC14000.00247825526.1705681
CTTCGGA19457.881825E-55.92205331
CTTAAAA19508.180128E-55.90686851
CTTGGAA16950.00339180535.52135371
TTCACGG15750.0096345385.4601638
CCAAAAT20057.5408304E-45.38578271
CTTTTGT26353.8854654E-55.19092661
CTTGAAA26754.9836824E-55.11330561
Produced by FastQC (version 0.11.5)