FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007082

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007082
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences805350
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTGTGCA3900.00675301413.728546145
CTCCAAT4700.00673086210.8816251
CTCAAAC6153.7515425E-410.692051
GTCCATT4850.00849884910.545081
TGAATTA6100.00460163469.4772323
CTCCAGA6600.0080342268.8560421
CGAAGAT9753.1877542E-48.242931
CTCAAAA10104.658537E-47.9572841
CATCAAT14053.7625243E-57.2802331
ATACCGC10300.0055088097.01504048
CTTTGAA13050.0069743816.1585111
CTTCTTT22602.2810727E-66.1424091
CAAAAAG19253.559717E-45.69316961
AGACCTC3650.007748955.146990375-79
Produced by FastQC (version 0.11.5)