FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007088

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007088
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences627685
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT2209.1032416E-725.7762227
ACACGTC2452.3235552E-623.1459968
CACGTCT2951.1603872E-519.2229469
AGAGCAC3754.7784342E-617.013663
GCACACG3801.01772064E-414.9230766
AGCACAC4001.5745359E-414.1769225
GAGCACA4302.9066255E-413.1878344
CTTTGGA6450.0083904828.8087311
AAGAGCA8250.00714750037.73471452
Produced by FastQC (version 0.11.5)