FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007089

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007089
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences482425
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGAGGAT4705.004148E-412.3645441
TTCAATC6758.4534564E-510.6758352
ACTTTAG1150.00241227810.248023135-139
CTTCAAT7050.00138458819.2734081
CCCGGAA7700.00308554398.4905871
ATGTGGG3100.0076152455.57840675-79
ATAGGCT3550.0056082855.2909346100-104
Produced by FastQC (version 0.11.5)