FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007093

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007093
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences990953
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCGCAT8200.00597863837.8912541
CACATTT10500.00728780876.8156453
AATCAAC10800.009583286.62498436
CTGTTCT12450.00505582066.35244131
CATCAAC16253.1059718E-46.1942971
CAAGAAT15400.0072506045.60244851
TTTGATA19706.3801015E-45.4526342
GAAAGAT18000.00697309345.192641
Produced by FastQC (version 0.11.5)