FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007097

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007097
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences824323
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGCGATT7502.4591954E-49.6067061
TTTACTG7400.00242918928.7192878
CTTCGAT8200.00586412157.9079591
AAATAAC8250.0064760977.82093766
ACTGCTG12650.0061456926.234087
CAAAAAG20051.842517E-56.10900261
GGAAGAT13150.0087212826.0270211
CTTTTCC24406.318119E-55.31518551
Produced by FastQC (version 0.11.5)