FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007106

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007106
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences881327
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTACGAT6100.0044400429.5185671
CCGTGAT8000.00439830038.1651461
CAACCAT8600.0084149537.59548471
CAACAAA14104.3062933E-57.20643331
CACAAAA12908.9596194E-46.75154261
CAAAGGA15501.4892449E-46.5555291
CAAGCTC12450.0048181026.3816839
TGCCGTT12500.0050236496.35615639
ATCAATG13700.00186201636.3287872
ACAAAAT18250.00773068665.14683532
Produced by FastQC (version 0.11.5)