FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007116

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007116
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences751562
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCAGAG2850.003360431615.2506581
CTCCAAC6350.00681569059.0353036
CTTTAAT8850.00121397858.1853811
CAAAAGA16004.0539617E-67.24406341
AATAACA11850.00309444756.6573417
CTTTCCG12400.0044789116.4261851
CAACAAC13100.0079263136.0828011
AAGATTT15350.0010833796.07462173
CAAAGAT15300.0062036935.6816181
ATCAAAA15900.0094805475.4672171
TTTTGCT17250.00435361735.40481337
Produced by FastQC (version 0.11.5)