FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007152

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007152
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences528255
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGGGGG1151.00186764E-412.326741140-144
CTGCAAC7350.00230032048.7706291
CAGATGC7900.00454749078.1337485
AAACAAA12105.195481E-47.08061845
GGAAAAA17850.00108080495.6177891
Produced by FastQC (version 0.11.5)