FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007163

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007163
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences581570
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGCTCC10206.9502817E-47.6647089
CTTTATT11502.7187905E-47.49166061
ATGCCGA8550.009622987.48134148
Produced by FastQC (version 0.11.5)