FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007173

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007173
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1419974
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCACAAT13051.5870446E-57.7708891
CTCGGAA8550.0081361817.62481981
GTTGGAT10300.00538268837.0326011
ATTTGCG12950.00742379166.12229826
CTTCCGT15700.00126471525.9978671
AGATTTG14450.00347880095.98619464
ATCTGAC13300.009780585.9611856
GTCAGAT14950.0048121015.8142441
CGATAAA19951.0399043E-45.80938671
CTTAAAA20251.2893404E-45.72332141
CTTTTGT27954.8621405E-75.7015651
CTAAAAA21052.2468899E-45.50580841
ATTTCCC19650.0033612525.13519576
Produced by FastQC (version 0.11.5)