FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007183

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007183
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences537470
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTATCGA2609.62559E-519.0757964
GCACACG3200.00838912513.284936
CTTTCCC6450.008192728.8339881
TTTTATC13350.00173081496.36880546
TTTATCA13700.00231559346.2060997
CGCCACG4253.5267972E-45.33481110-14
Produced by FastQC (version 0.11.5)