FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007189

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007189
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences744359
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTGGCT5452.1892655E-411.3320488
CTTTGCT7906.26012E-59.574881
CTAAAAT6050.0064689759.0928981
CTTCAAC7900.0063784887.83399251
CAGATTT9800.0056025737.00270033
Produced by FastQC (version 0.11.5)