FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007210

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007210
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences681629
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AATTCAC5702.1771835E-411.3385185
GTTCATT7850.00388147388.2786151
CTTTAAT9350.00215352967.72277161
CTTTCAT13150.0085212976.0402061
AAGGGTA3700.0095926565.053491625-29
Produced by FastQC (version 0.11.5)