FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007215

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007215
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1197863
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT4201.8189894E-1223.9604057
CACGTCT5852.6557245E-1017.2023439
ACACGTC6401.6079866E-814.6008738
GAGCACA8954.0017767E-1113.6545554
GCACACG8101.8299033E-913.31078156
AGCACAC8152.0063453E-913.229125
AGAGCAC8253.365858E-812.1990443
GAAGAGC15101.853763E-67.6337611
AAGAGCA17251.829143E-67.08690452
CTTGGAA11450.0020583666.92122131
AGTCACC4802.918529E-45.091756320-24
CAAAGAA24102.9935013E-45.08191441
Produced by FastQC (version 0.11.5)