FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007219

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007219
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1395184
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCGCGT6759.5512526E-49.6604521
CCCCAAT8250.0058956967.90400651
CAAAGAG16901.4338366E-77.7169291
CTTTGAG14355.5631877E-57.0686241
CAAAACT12050.00331876876.61400271
ATTGAAG18605.5282126E-66.60404736
ACAGTTC12800.00641069476.20950464
CTTTAAT18754.21443E-56.1826891
AATTTGC17100.00360252685.493155
CGAAGAT18500.00147638695.48295931
CTAAAAA18350.0079886485.13293741
TTTTACA24353.3421256E-45.044577
CCCGAAA21700.00198321355.0082991
Produced by FastQC (version 0.11.5)