FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007222

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007222
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences445703
Sequences flagged as poor quality0
Sequence length100-151
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTATGG4750.006742887710.877221
CAAAGGT5750.00236469210.2691771
CTCAAAA7800.0030005378.5165061
AAGACAC2400.0032573616.626215570-74
GCCGCGT2450.0040354346.492006345-49
Produced by FastQC (version 0.11.5)