FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007231

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007231
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1277728
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTACCC4700.00808933110.6163255
GAAACCC7150.00187524448.9720889
CATAAAC11252.2250775E-47.6247961
CAAATGT12307.5488584E-57.5550561
CACAGCT10400.00672040976.87331341
GGAGGAT16300.0023185955.7010551
AAATCTT23453.9728824E-55.47382264
TTCCATC21353.456245E-45.3416969
Produced by FastQC (version 0.11.5)