FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007239

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007239
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1331562
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAGCTA1000.00794781610.642657120-124
GAATCTA6300.0072929168.9620274
CGTCAAT14154.7251544E-46.50722361
CCTCCAT14050.00309320056.04942041
CTTCTGA20059.370212E-45.29891
Produced by FastQC (version 0.11.5)