FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007247

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007247
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences751312
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCGAAT4200.002977405212.1382581
CCCACAT5450.00169476510.69057751
AGATGAG6154.2699536E-410.54307655
GAGCGTC4800.00873237710.5064698
ACAAATC8100.00525504548.0049292
CCCGGCT8200.00532289277.99348741
GTTCCTT10000.00382446687.2829551
CATAAAT10700.0073779126.80650041
CTTTTAT13050.00720744446.138891
Produced by FastQC (version 0.11.5)