FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007250

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007250
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1071350
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCCAATT5300.001477670210.8686152
AGATCAC7050.00150810369.1890716
CTACAAA9200.00181232367.8603451
CGATTCT8550.0086001117.57730674
TGAACTT14350.00326714226.01960233
CATCAAT17300.00409005685.4340881
Produced by FastQC (version 0.11.5)