FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007266

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007266
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1233667
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTCTGG12808.157452E-46.8080231
AATGTAA12000.00327103386.62300835
CCCGTTT12650.005382226.31468771
CAACAAT14200.00263405856.13680931
CTTCAAT16050.00159738755.88190561
CAAGAAG18000.00101335955.64813761
Produced by FastQC (version 0.11.5)