FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007275

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007275
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences585496
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCCCTT3950.002054805612.7525291
CAAACGA4100.002718159712.2859741
CTTCTAT6253.9209204E-511.5137111
CAAACAT4650.006955838310.8327921
TCTTGTC5700.002851601210.0410872
TCAATCC6000.0043614689.53821853
CTTGTCC7300.00218772848.8195853
TCCGCTG8150.00590939037.90042642
ATTTGTT8600.0090739447.53077031
CTTCAAA8650.0095556087.487241
CAAAAAG12150.00387722886.51496031
Produced by FastQC (version 0.11.5)