FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007276

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007276
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences622882
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCTAGA701.8157226E-459.198284145
GTTAAAT3900.00254235912.3962211
TAAATCT5850.0047816619.432619
GGTAAAT6350.0092789618.7010591
AAATTGT7400.00344084068.3896423
AATTGTT8550.00139943048.0680114
AAAGGTT8050.0073361697.71221644
Produced by FastQC (version 0.11.5)