FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007278

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007278
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences724478
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCAACG4001.512338E-414.2448967
CTTTAAT9001.6648576E-48.7529381
CTTCAAG8206.379191E-48.7335311
GTTTTAC8358.066799E-48.5298786
GATGATA11653.4470327E-47.3394662
CTGCAAA16550.00271256455.6253441
Produced by FastQC (version 0.11.5)