FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007279

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007279
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1289602
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCATGT7900.0044342958.1583451
CCCAAAT8150.00586782357.90808961
GTCTGAC8300.00691022777.76517251
CCACAAC10200.00547039377.02079871
TTGGATT12557.8560767E-46.8306462
ATACGAT12250.0044539086.4304781
ACGATAT14550.00415811835.89104033
GTCAAGG22051.3868463E-55.8458891
TTTGCGG17750.00104875285.63295177
TGGATTT18100.0080362155.130253
CAAAAAT22506.7915133E-45.0924191
Produced by FastQC (version 0.11.5)