FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007284

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007284
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1236754
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTCGGT11302.0106201E-47.69189641
CTTCAGG13001.27164E-47.24320361
CATAGAT12350.00430477976.4514361
GTTTTGA15600.0077086645.5716951
CTGAAAT19655.293322E-45.52916241
TTTAATT25751.4601949E-45.04027562
Produced by FastQC (version 0.11.5)