FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007289

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007289
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences529894
Sequences flagged as poor quality0
Sequence length100-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTTTAA3408.080424E-414.4315471
TACATTT4100.00340074411.923583
TTGCAAA6406.770515E-510.9122059
GTTTTTG6458.800406E-49.7448535
AAAGGAA9750.00441810637.17507122
TGTTTTT10800.00153764667.11314154
Produced by FastQC (version 0.11.5)