FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007290

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007290
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9393749
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGCATG28150.07.71353538
TAACCCC27450.07.6465639
AGTGAGT30951.6148988E-85.86161381
GTGAGTA33609.8141754E-85.3948512
CTCGAAT35204.6662535E-85.3600461
CCTTTAG49707.094059E-115.10597664
Produced by FastQC (version 0.11.5)