FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007296

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007296
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences551514
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCTAAT1255.3353666E-428.826131
TAGGGCG1450.001285690524.7960419
CTCCGCT4150.00294406412.1555971
CAATATT7650.00319009278.45982554
GATAGAA8000.00468317568.1073491
Produced by FastQC (version 0.11.5)