FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007300

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007300
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences504087
Sequences flagged as poor quality0
Sequence length100-151
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCATAT3000.004785575414.4595991
CATGGGA3050.00540053814.1985729
CTGGAAC5401.2349311E-412.0496651
CAACGAA4400.004449983611.5019531
CTAAAAC4500.005261862711.2463551
AACGAAA7500.0025729348.66284752
AACGTGG2550.00622234358.4921456
CTTTGAA10150.00474196257.1229551
CTTGAAA10750.0082727846.72539471
CTTCTTT16906.8969355E-56.41698171
AAAAGAT16450.00229073225.7050163
Produced by FastQC (version 0.11.5)