FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007307

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007307
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences661198
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAGACT100.0091347275133.216843
ATTCGTC4750.001133272811.218266
GTCAAAC4900.00143991810.9012271
CAACAAT7700.00659747247.8042871
CTTTATT11050.003144946.64678861
CTTTTGA11800.00624196846.22432331
ATTTTCC15956.511011E-45.84650666
CAAAAAA22054.2323758E-55.4506141
CAAAAAT17150.00158633135.45061351
Produced by FastQC (version 0.11.5)