FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007319

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007319
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences492446
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCCTCG1850.00593007519.0530341
GACTGCG3750.001672355213.1058456
CTTCCAT7352.4945187E-49.5913241
CTTTGAA8207.15697E-59.4568121
TTCCATC9100.00216915767.7161562
CTTTTTT17301.9241295E-56.51988271
Produced by FastQC (version 0.11.5)