FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007333

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007333
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2104514
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCCCC6650.0094329538.6853099
CGATAGT10450.00614328366.93777941
CTCAATT11750.00253132966.7872151
CTACCGT13050.007570096.11109451
CTCCGCT16854.458446E-46.0237221
CTCCAAT16100.00169260075.85402061
CAACGAT22351.4163299E-55.8389091
GTCAAAT16600.00243699575.6776951
GGATTGT18350.00132240165.53131961
TAAAGAT28003.2018888E-65.41603473
CCCAGAT19000.00205129435.342091
ATTCCCA22104.7024785E-45.22740276
GTTCAAT19650.00312664925.165381
CTCCGAA19700.00322744675.152271
Produced by FastQC (version 0.11.5)