FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007340

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007340
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1599088
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCAAGT6100.005004199.3823221
CTCAACT7850.004226958.2020621
AGAGCAC9653.990695E-48.0739373
CTCCTAT8200.00625655577.85197351
CTCGGAA12356.437682E-46.95127531
TCAACTT13400.00181812426.3430252
CTTTAAT17156.625673E-45.8400171
CTTCTAT18903.7021565E-45.67779451
CTTCGGA18600.00185495095.3847471
TTCAATT19100.0029322885.19176052
AAGATTC17900.0077907265.14411073
Produced by FastQC (version 0.11.5)