FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007348

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007348
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences872146
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCCTGG3305.456456E-415.2003791
GTCATCT6500.0083117288.8195611
GTCCCGG7750.00370601298.3216821
CAAATAT14003.5963248E-46.65404371
AAAATCT16700.00341022675.5180663
Produced by FastQC (version 0.11.5)