FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007352

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007352
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences541328
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGTAGG2350.001060709818.1202776
TTCGTGC4750.00903797510.45696459
CTTCAAA8500.0087562537.56068751
CAAAAAA14155.5761306E-57.0649531
Produced by FastQC (version 0.11.5)