FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007356

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007356
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1056854
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTGGTT4800.00800132113.38116145
GTCCGAT6100.00574950049.224891
AAATTAA10601.5217323E-47.8789044
AATTAAA12850.00139506346.493185
GTTCCAT15750.0018653425.8058241
GTCCAGC19708.1152865E-45.3558211
Produced by FastQC (version 0.11.5)