FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007358

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007358
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences946841
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTAACC3552.5347617E-618.1852321
TTAACCG3150.007086748313.6297592
TGTTACC7250.0020684658.8753387
GGATTCT10601.1120729E-48.0942896
CGTTGAT9600.00297945327.47194051
TCCAGAT14750.0047858465.8166057
CTTTTCA18450.0099203945.0379094
Produced by FastQC (version 0.11.5)