FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007363

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007363
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2090808
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCTAAC6200.0057812589.21950156
GGTATTA16350.0023362275.6978911
GTAGAAT16400.0024226095.68051961
GGTATTT25303.55689E-65.66497561
GGTAAAA33351.0712574E-75.37195971
CTTTAAC18200.0082574995.118711
Produced by FastQC (version 0.11.5)