FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007366

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007366
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences440643
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT1359.897548E-425.9322327
ACACGTC1800.005264398619.4491738
CACGTCT1850.006167371818.923529
AGAGCAC3000.00591802514.0034053
ATAGGGT1357.3901593E-49.934947110-114
CGGAAAA10600.0096012956.6219111
Produced by FastQC (version 0.11.5)