FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007368

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007368
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences530569
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCCCT1306.6194567E-427.782446
CCTCAAT3350.00985693812.9643921
GAAATCG7450.00240861558.7262965
CTTCATT10200.00491754527.09652141
TTCTATT10250.00526204057.04725362
ATTAAAA10650.00747333936.79666851
CTCTTTT12100.00349061566.5804111
Produced by FastQC (version 0.11.5)