FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007369

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007369
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences870358
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCCCAG3851.0113654E-414.935281
TTTTAAG12054.756493E-47.13680172
GTTTTAA10600.00765618086.78075741
AAGATTT19401.2074464E-56.2788743
CTTCAAA15550.00123527086.00892831
CTTTGAA15350.00701604045.61897331
AATCTTT19500.00328012325.1446165
CATAAAA18550.0099352395.03713371
Produced by FastQC (version 0.11.5)