FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007370

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007370
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1033607
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCAAATA8600.00124676698.1640268
CCCAGAT9800.0044894587.16469573
CTTAAAA10600.0091987866.65325451
CTTTGAT18356.523367E-66.53360371
CTTTTAT15201.6790464E-46.4956771
CTTTTGG12050.00439838276.437921
CTTTGCT14100.0033748586.00208431
AAGGCGG15450.0097605595.45325235
ATAAAAT21050.00189343825.0254981
Produced by FastQC (version 0.11.5)