Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005007372 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 906436 |
Sequences flagged as poor quality | 0 |
Sequence length | 100-151 |
%GC | 47 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTGTAT | 640 | 5.0354283E-5 | 11.236304 | 1 |
GGTAAAT | 1015 | 6.267314E-5 | 8.501952 | 1 |
CCTGAAT | 985 | 0.0037363877 | 7.300746 | 1 |
CAAGTTC | 1080 | 0.009422332 | 6.6365104 | 3 |
TCAGATA | 1190 | 0.0032265463 | 6.63121 | 2 |
CTTCAAT | 1225 | 0.0042601423 | 6.4574356 | 1 |
GGATAAA | 1520 | 9.338908E-4 | 6.1503987 | 1 |
GCGCTGG | 1325 | 0.0099626575 | 5.9499917 | 8 |