FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007372

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007372
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences906436
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTGTAT6405.0354283E-511.2363041
GGTAAAT10156.267314E-58.5019521
CCTGAAT9850.00373638777.3007461
CAAGTTC10800.0094223326.63651043
TCAGATA11900.00322654636.631212
CTTCAAT12250.00426014236.45743561
GGATAAA15209.338908E-46.15039871
GCGCTGG13250.00996265755.94999178
Produced by FastQC (version 0.11.5)