FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007373

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007373
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences865459
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAAACG1952.6488095E-422.264551
TTAGTCT2250.00444512220.028357145
CTCGGAA6350.00633615359.1161931
CTTTAAT12106.059727E-78.9702211
CTTCTGA9600.0027347337.53747751
TTCAATA16450.00227083225.71046972
Produced by FastQC (version 0.11.5)