FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007377

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007377
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences984330
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCAAGC8255.9507136E-59.6200896
CTCAAAT8000.00461686088.1214881
GAGATGC8100.0051887498.0167415
CTTCCGT12751.0417568E-47.3606511
TTCCGTC15450.0072253155.60421942
TAAAATC17100.0036595525.48541642
CATCAAT18400.0085946015.10045151
Produced by FastQC (version 0.11.5)