FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007379

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007379
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences583188
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT2351.6985614E-623.9946297
CACGTCT2354.605576E-520.99539
ACACGTC2651.15972325E-418.6184758
GAGCACA3202.4540988E-517.6210564
GCACACG3303.19632E-517.0870846
AGAGCAC3356.9236726E-414.7293093
AGCACAC4102.0368892E-413.7530195
CAAACGG6054.34887E-410.5213411
CACACAT2550.0079697096.080991725-29
Produced by FastQC (version 0.11.5)