FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007382

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007382
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1202457
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTAAGA5207.813517E-512.6578041
CCTTAAT7157.907438E-712.2742341
CCTCGAT12701.016997E-89.7895881
GTTCGTT6600.0079747518.8647241
CTCCATT13001.3260635E-57.87596651
TCGACAT10709.799002E-47.42338283
TTCGATT10250.00529143267.0448072
CATTGAG10400.0053848047.03211361
CTTCAAT17456.2351534E-45.8674821
CAACAAT15100.0048312415.8119711
CTTCAAA20851.707531E-45.61221
CTTCCGG24104.106982E-55.4622891
CTTTATT19900.00327978145.1451041
Produced by FastQC (version 0.11.5)